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# Copyright 1999-2004 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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# $Header: /var/cvsroot/gentoo-x86/app-sci/prints/prints-37.0.ebuild,v 1.4 2004/08/10 23:58:04 ribosome Exp $ |
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DESCRIPTION="A protein motif fingerprint database" |
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HOMEPAGE="http://www.bioinf.man.ac.uk/dbbrowser/PRINTS/" |
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SRC_URI="ftp://ftp.ebi.ac.uk/pub/databases/${PN}/newpr.lis.gz |
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ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}37_0.all.fasta.Z |
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ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}37_0.dat.gz |
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ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}37_0.lis.gz |
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ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}37_0.nam.gz |
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ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}37_0.vsn.gz" |
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LICENSE="public-domain" |
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SLOT="0" |
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KEYWORDS="x86 ~ppc" |
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IUSE="no-emboss no-rawdb" |
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|
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S=${WORKDIR} |
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|
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src_compile() { |
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# Index the database for use with emboss if emboss is installed and |
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# the user did not explicitly request not to index the database. |
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if [ -e /usr/bin/printsextract ] && ! use no-emboss; then |
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mkdir PRINTS |
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einfo "Indexing PRINTS for usage with EMBOSS." |
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EMBOSS_DATA=. printsextract -auto -infile prints37_0.dat || die \ |
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"Indexing PRINTS failed." |
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fi |
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} |
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|
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src_install() { |
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if ! use no-rawdb; then |
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insinto /usr/share/${PN} |
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doins ${PN}37_0.{all.fasta,dat,lis,nam,vsn} newpr.lis |
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fi |
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if [ -e /usr/bin/printsextract ] && ! use no-emboss; then |
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insinto /usr/share/EMBOSS/data/PRINTS |
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doins PRINTS/* |
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fi |
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} |
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