/[gentoo-x86]/sci-biology/allpaths/allpaths-2.0.ebuild
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Revision 1.1 Revision 1.2
1# Copyright 1999-2009 Gentoo Foundation 1# Copyright 1999-2009 Gentoo Foundation
2# Distributed under the terms of the GNU General Public License v2 2# Distributed under the terms of the GNU General Public License v2
3# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpaths/Attic/allpaths-2.0.ebuild,v 1.1 2009/07/07 23:09:24 weaver Exp $ 3# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpaths/Attic/allpaths-2.0.ebuild,v 1.2 2009/07/08 03:50:03 weaver Exp $
4 4
5EAPI="2" 5EAPI="2"
6 6
7DESCRIPTION="De novo assembly of whole-genome shotgun microreads" 7DESCRIPTION="De novo assembly of whole-genome shotgun microreads"
8HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd" 8HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd"
19RDEPEND="" 19RDEPEND=""
20 20
21S="${WORKDIR}" 21S="${WORKDIR}"
22 22
23src_prepare() { 23src_prepare() {
24 rm -f libxerces* || die 24 rm -rf libxerces* xerces_include || die
25} 25}
26 26
27src_install() { 27src_install() {
28 rm -rf bin/auxfiles 28 rm -rf bin/auxfiles
29 exeinto /usr/share/${PN}/bin
29 dobin bin/* || die 30 doexe bin/* || die
31 echo "PATH=\"/usr/share/${PN}/bin\"" > "${S}/99${PN}"
32 doenvd "${S}/99${PN}" || die
33 dosym /usr/share/${PN}/bin/RunAllPaths /usr/bin/RunAllPaths || die
30 insinto /usr/share/doc/${PF} 34 insinto /usr/share/doc/${PF}
31 doins "${DISTDIR}/${P}.manual.docx" 35 doins "${DISTDIR}/${P}.manual.docx"
32} 36}

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