/[gentoo-x86]/sci-biology/allpaths/allpaths-2.0.ebuild
Gentoo

Diff of /sci-biology/allpaths/allpaths-2.0.ebuild

Parent Directory Parent Directory | Revision Log Revision Log | View Patch Patch

Revision 1.2 Revision 1.3
1# Copyright 1999-2009 Gentoo Foundation 1# Copyright 1999-2009 Gentoo Foundation
2# Distributed under the terms of the GNU General Public License v2 2# Distributed under the terms of the GNU General Public License v2
3# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpaths/Attic/allpaths-2.0.ebuild,v 1.2 2009/07/08 03:50:03 weaver Exp $ 3# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpaths/Attic/allpaths-2.0.ebuild,v 1.3 2009/08/20 16:56:10 weaver Exp $
4 4
5EAPI="2" 5EAPI="2"
6
7inherit base
6 8
7DESCRIPTION="De novo assembly of whole-genome shotgun microreads" 9DESCRIPTION="De novo assembly of whole-genome shotgun microreads"
8HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd" 10HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd"
9SRC_URI="ftp://ftp.broad.mit.edu/pub/crd/ALLPATHS/Release-2-0/allpaths-2.0.tar.gz 11SRC_URI="ftp://ftp.broad.mit.edu/pub/crd/ALLPATHS/Release-2-0/allpaths-2.0.tar.gz
10 ftp://ftp.broad.mit.edu/pub/crd/ALLPATHS/Release-2-0/allpaths-2.0.manual.docx" 12 ftp://ftp.broad.mit.edu/pub/crd/ALLPATHS/Release-2-0/allpaths-2.0.manual.docx"
16 18
17# TODO: info message on failure instructing to run gcc-config 19# TODO: info message on failure instructing to run gcc-config
18DEPEND=">=sys-devel/gcc-4.3.2" 20DEPEND=">=sys-devel/gcc-4.3.2"
19RDEPEND="" 21RDEPEND=""
20 22
23PATCHES=(
24 "${FILESDIR}"/${P}-gcc-x86-no-autocast.patch
25)
26
21S="${WORKDIR}" 27S="${WORKDIR}"
22 28
23src_prepare() { 29src_prepare() {
30 base_src_prepare
24 rm -rf libxerces* xerces_include || die 31 rm -rf libxerces* xerces_include || die
25} 32}
26 33
27src_install() { 34src_install() {
28 rm -rf bin/auxfiles 35 rm -rf bin/auxfiles

Legend:
Removed from v.1.2  
changed lines
  Added in v.1.3

  ViewVC Help
Powered by ViewVC 1.1.20