/[gentoo-x86]/sci-biology/allpaths/allpaths-3.1.ebuild
Gentoo

Contents of /sci-biology/allpaths/allpaths-3.1.ebuild

Parent Directory Parent Directory | Revision Log Revision Log


Revision 1.1 - (show annotations) (download)
Tue Jan 26 20:43:21 2010 UTC (4 years, 7 months ago) by weaver
Branch: MAIN
Version bump
(Portage version: 2.2_rc30/cvs/Linux x86_64, RepoMan options: --force)

1 # Copyright 1999-2010 Gentoo Foundation
2 # Distributed under the terms of the GNU General Public License v2
3 # $Header: /var/cvsroot/gentoo-x86/sci-biology/allpaths/allpaths-2.0.ebuild,v 1.4 2009/11/24 20:48:06 fauli Exp $
4
5 EAPI="2"
6
7 inherit base
8
9 DESCRIPTION="De novo assembly of whole-genome shotgun microreads"
10 HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd"
11 SRC_URI="ftp://ftp.broad.mit.edu/pub/crd/ALLPATHS/Release-3-0/allpaths-${PV}.tgz
12 ftp://ftp.broad.mit.edu/pub/crd/ALLPATHS/Release-3-0/AllPathsV3_Manual_r1.0.docx"
13
14 LICENSE="Whitehead-MIT"
15 SLOT="3"
16 IUSE=""
17 KEYWORDS="~amd64"
18
19 DEPEND=">=sys-devel/gcc-4.3.2"
20 RDEPEND=""
21
22 S="${WORKDIR}/AllPaths"
23
24 src_compile() {
25 base_src_compile
26 emake install_scripts || die
27 }
28
29 src_install() {
30 exeinto /usr/share/${P}/bin
31 find bin -type f -executable | xargs doexe || die
32 echo "PATH=\"/usr/share/${P}/bin\"" > "${S}/99${P}"
33 doenvd "${S}/99${P}" || die
34 dosym /usr/share/${P}/bin/RunAllPaths3G /usr/bin/RunAllPaths3G || die
35 insinto /usr/share/doc/${PF}
36 doins "${DISTDIR}/AllPathsV3_Manual_r1.0.docx"
37 }

  ViewVC Help
Powered by ViewVC 1.1.20