/[gentoo-x86]/sci-biology/picard/picard-1.58.ebuild
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Contents of /sci-biology/picard/picard-1.58.ebuild

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Revision 1.1 - (show annotations) (download)
Wed Jan 4 03:41:51 2012 UTC (2 years, 10 months ago) by weaver
Branch: MAIN
New package, ebuild written by me

(Portage version: 2.2.0_alpha74/cvs/Linux x86_64)

1 # Copyright 1999-2012 Gentoo Foundation
2 # Distributed under the terms of the GNU General Public License v2
3 # $Header: /var/cvsroot/gentoo-x86/sci-biology/gatk/gatk-1.3.ebuild,v 1.1 2011/12/26 05:40:50 weaver Exp $
4
5 EAPI=4
6
7 #ESVN_REPO_URI="https://picard.svn.sourceforge.net/svnroot/picard/trunk"
8 ESVN_REPO_URI="https://picard.svn.sourceforge.net/svnroot/picard/tags/${PV}"
9
10 EANT_BUILD_TARGET="all"
11 JAVA_ANT_REWRITE_CLASSPATH="true"
12 EANT_NEEDS_TOOLS="true"
13 WANT_ANT_TASKS="ant-apache-bcel"
14
15 inherit subversion java-pkg-2 java-ant-2
16
17 DESCRIPTION="Java-based command-line utilities that manipulate SAM files"
18 HOMEPAGE="http://picard.sourceforge.net/"
19 SRC_URI=""
20 LICENSE="Apache-2.0"
21 SLOT="0"
22 IUSE=""
23 KEYWORDS="~amd64"
24
25 COMMON_DEPS=""
26 DEPEND=">=virtual/jdk-1.6
27 dev-java/ant-apache-bcel:0
28 app-arch/zip
29 ${COMMON_DEPS}"
30 RDEPEND=">=virtual/jre-1.6
31 ${COMMON_DEPS}"
32
33 src_install() {
34 cd dist
35 for i in *-${PV}.jar; do java-pkg_newjar $i ${i/-${PV}/}; rm $i; done
36 java-pkg_dojar *.jar
37 for i in *.jar; do java-pkg_dolauncher ${i/.jar/} --jar $i; done
38 }

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