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Revision 1.5 - (show annotations) (download)
Thu Dec 23 18:39:06 2004 UTC (12 years, 10 months ago) by ribosome
Branch: MAIN
CVS Tags: HEAD
Changes since 1.4: +1 -1 lines
FILE REMOVED
Moving to sci-biology/gibbs

1 # Copyright 1999-2004 Gentoo Foundation
2 # Distributed under the terms of the GNU General Public License v2
3 # $Header: /var/cvsroot/gentoo-x86/app-sci/gibbs/gibbs-1995.9.ebuild,v 1.4 2004/11/01 01:50:38 ribosome Exp $
4
5 DESCRIPTION="A Gibbs sampling algorithm for local alignment of subtle sequence signals in multiple protein sequences."
6
7 HOMEPAGE="http://www.people.fas.harvard.edu/~junliu/index1.html"
8
9 SRC_NAME="gibbs9_95" # 9_95 refers to the september 1995 version
10 SRC_URI="http://www.fas.harvard.edu/~junliu/Software/${SRC_NAME}.tar"
11
12 LICENSE="public-domain"
13
14 SLOT="0"
15 KEYWORDS="x86"
16 IUSE=""
17
18 DEPEND="virtual/libc"
19
20 S=${WORKDIR}/${SRC_NAME}/code
21
22 src_compile() {
23 LIBS="-lm" make -e || die
24 }
25
26 src_install() {
27 cd ${WORKDIR}/${SRC_NAME}
28 dobin gibbs purge scan
29 dobin ${FILESDIR}/gibbs-demo
30
31 dodoc README
32
33 insinto /usr/share/${PN}
34 doins demo.out
35 insinto /usr/share/${PN}/examples
36 doins examples/*
37 }
38
39 pkg_postinst() {
40 einfo 'Testcase: To ensure the gibbs sampler works correctly,'
41 einfo 'run "gibbs-demo > mydemo.out" and compare "mydemo.out"'
42 einfo 'with "/usr/share/gibbs/demo.out" using diff. The files'
43 einfo 'should differ only by their timing statistics and the'
44 einfo 'paths of the example files.'
45 }

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