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# Copyright 1999-2004 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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# $Header: /var/cvsroot/gentoo-x86/app-sci/vienna-rna/vienna-rna-1.4.ebuild,v 1.4 2004/11/01 03:03:35 ribosome Exp $ |
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|
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inherit flag-o-matic |
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|
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DESCRIPTION="Vienna RNA Package - RNA secondary structure prediction and comparison" |
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HOMEPAGE="http://www.tbi.univie.ac.at/~ivo/RNA/" |
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SRC_URI="http://www.tbi.univie.ac.at/~ivo/RNA/ViennaRNA-${PV}.tar.gz" |
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LICENSE="vienna-rna" |
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|
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SLOT=0 |
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KEYWORDS="x86 ~ppc" |
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IUSE="no-utils no-readseq perl" |
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|
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DEPEND="perl? ( dev-lang/perl ) |
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!no-utils? ( dev-lang/perl )" |
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|
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S="${WORKDIR}/ViennaRNA-${PV}" |
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|
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src_compile() { |
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sed -ie 's:/usr/local/bin/perl:/usr/bin/perl:' Perl/RNAfold.pl |
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sed -ie 's:/usr/local/bin/perl:/usr/bin/perl:' Utils/ct2b.pl |
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sed -ie 's:/usr/local/bin/perl:/usr/bin/perl:' Utils/b2mt.pl |
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sed -ie 's:/usr/local/bin/perl:/usr/bin/perl:' Utils/dpzoom.pl |
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sed -ie 's:/usr/local/bin/perl:/usr/bin/perl:' Utils/mountain.pl |
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append-flags -I../H |
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make -e library programs gammel subopt || die |
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use perl && make -e perl || die |
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use no-utils || make -e util || die |
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use no-readseq || cd Readseq && make -e || die |
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} |
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|
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src_install() { |
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insinto /usr/include/vienna-rna |
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doins H/* |
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dolib.a lib/libRNA.a |
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dobin Cluster/{AnalyseDists,AnalyseSeqs} |
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dobin Progs/RNA{distance,eval,fold,heat,inverse,pdist} |
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dobin Subopt/{RNAsubopt,popt} |
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|
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dodoc CHANGES CREDITS README |
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doinfo man/RNAlib.info |
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newman man/AnalyseDists.man AnalyseDists.man.1 |
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newman man/AnalyseSeqs.man AnalyseSeqs.man.1 |
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newman man/RNAdistance.man RNAdistance.man.1 |
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newman man/RNAeval.man RNAeval.man.1 |
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newman man/RNAfold.man RNAfold.man.1 |
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newman man/RNAheat.man RNAheat.man.1 |
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newman man/RNAinverse.man RNAinverse.man.1 |
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newman man/RNApdist.man RNApdist.man.1 |
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newman Subopt/RNAsubopt.man RNAsubopt.man.1 |
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dohtml man/RNAlib.html |
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insinto /usr/share/doc/${P}/pdf |
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doins man/RNAlib.pdf |
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|
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if use perl; then |
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cd Perl |
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make install DESTDIR=${D} || die |
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dodoc RNA_wrap.doc |
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cd ${S} |
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fi |
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|
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if ! use no-utils; then |
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dobin Utils/{b2ct,ct2b.pl,dpzoom.pl,mountain.pl,b2mt.pl,Fold,RNAplot} |
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newdoc Utils/README README.utils |
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newman Utils/RNAplot.man RNAplot.man.1 |
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fi |
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|
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if ! use no-readseq; then |
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newbin Readseq/readseq readseq-vienna |
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newdoc Readseq/Readme README.readseq |
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newdoc Readseq/Formats FORMATS.readseq |
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newdoc Readseq/README README.readseq-vienna |
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fi |
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} |
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