/[gentoo-x86]/sci-biology/bioperl-run/bioperl-run-9999-r1.ebuild
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Contents of /sci-biology/bioperl-run/bioperl-run-9999-r1.ebuild

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Revision 1.2 - (show annotations) (download)
Tue Sep 20 22:19:00 2011 UTC (3 years, 7 months ago) by mgorny
Branch: MAIN
Changes since 1.1: +5 -4 lines
Migrate to git-2.

(Portage version: 2.2.0_alpha59/cvs/Linux x86_64)

1 # Copyright 1999-2011 Gentoo Foundation
2 # Distributed under the terms of the GNU General Public License v2
3 # $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-9999-r1.ebuild,v 1.1 2010/10/17 22:18:33 weaver Exp $
4
5 EAPI="2"
6
7 inherit perl-module git-2
8
9 DESCRIPTION="Perl tools for bioinformatics - Wrapper modules around key bioinformatics applications"
10 HOMEPAGE="http://www.bioperl.org/"
11 SRC_URI=""
12 EGIT_REPO_URI="git://github.com/bioperl/${PN}.git
13 https://github.com/bioperl/${PN}.git"
14
15 LICENSE="Artistic GPL-2"
16 SLOT="0"
17 KEYWORDS=""
18 IUSE="-minimal test"
19 #SRC_TEST="do"
20
21 RESTRICT="test"
22
23 CDEPEND=">=sci-biology/bioperl-${PV}
24 !minimal? (
25 dev-perl/Algorithm-Diff
26 dev-perl/XML-Twig
27 dev-perl/IO-String
28 dev-perl/IPC-Run
29 )"
30 DEPEND="virtual/perl-Module-Build
31 ${CDEPEND}"
32 RDEPEND="${CDEPEND}"
33
34 S="${WORKDIR}/BioPerl-run-${PV}"
35
36 src_install() {
37 mydoc="AUTHORS BUGS FAQ"
38 perl-module_src_install
39 # TODO: File collision in Bio/ConfigData.pm (a Module::Build internal file)
40 # with sci-biology/bioperl. Workaround: the "nuke it from orbit" solution :D
41 find "${D}" -name '*ConfigData*' -print -delete
42 }

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