/[gentoo-x86]/sci-biology/maq/maq-0.7.1-r1.ebuild
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Contents of /sci-biology/maq/maq-0.7.1-r1.ebuild

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Revision 1.1 - (hide annotations) (download)
Thu Apr 14 07:46:27 2011 UTC (8 years, 10 months ago) by jlec
Branch: MAIN
Fix for _FORTIFY_SOURCE indicates presence of overflow, #363537; Don't mix FLAGS

(Portage version: 2.2.0_alpha30/cvs/Linux x86_64)

1 jlec 1.1 # Copyright 1999-2011 Gentoo Foundation
2     # Distributed under the terms of the GNU General Public License v2
3     # $Header: /var/cvsroot/gentoo-x86/sci-biology/maq/maq-0.7.1.ebuild,v 1.4 2009/04/04 19:19:39 maekke Exp $
4    
5     EAPI="4"
6    
7     inherit autotools eutils
8    
9     DESCRIPTION="Mapping and Assembly with Qualities - mapping Solexa and SOLiD reads to reference sequences"
10     HOMEPAGE="http://maq.sourceforge.net/"
11     SRC_URI="
12     mirror://sourceforge/${PN}/${P}.tar.bz2
13     mirror://sourceforge/${PN}/calib-36.dat.gz"
14    
15     LICENSE="GPL-3"
16     SLOT="0"
17     IUSE=""
18     KEYWORDS="~amd64 ~x86"
19    
20     DEPEND=""
21     RDEPEND=""
22    
23     src_prepare() {
24     epatch \
25     "${FILESDIR}"/${P}-flags.patch \
26     "${FILESDIR}"/${P}-bfr-overfl.patch
27     eautoreconf
28     }
29    
30     src_install() {
31     default
32     insinto /usr/share/maq
33     doins "${WORKDIR}"/*.dat || die
34     doman maq.1
35     dodoc ${PN}.pdf
36     }

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