/[gentoo-x86]/sci-biology/maq/maq-0.7.1-r1.ebuild
Gentoo

Contents of /sci-biology/maq/maq-0.7.1-r1.ebuild

Parent Directory Parent Directory | Revision Log Revision Log


Revision 1.4 - (hide annotations) (download)
Thu Dec 15 22:37:04 2011 UTC (8 years, 2 months ago) by jlec
Branch: MAIN
Changes since 1.3: +4 -1 lines
Add missing dependency on sys-libs/zlib

(Portage version: 2.2.0_alpha81/cvs/Linux x86_64)

1 jlec 1.1 # Copyright 1999-2011 Gentoo Foundation
2     # Distributed under the terms of the GNU General Public License v2
3 jlec 1.4 # $Header: /var/cvsroot/gentoo-x86/sci-biology/maq/maq-0.7.1-r1.ebuild,v 1.3 2011/12/15 22:26:13 ago Exp $
4 jlec 1.1
5 jlec 1.2 EAPI=4
6 jlec 1.1
7     inherit autotools eutils
8    
9     DESCRIPTION="Mapping and Assembly with Qualities - mapping Solexa and SOLiD reads to reference sequences"
10     HOMEPAGE="http://maq.sourceforge.net/"
11     SRC_URI="
12     mirror://sourceforge/${PN}/${P}.tar.bz2
13     mirror://sourceforge/${PN}/calib-36.dat.gz"
14    
15     LICENSE="GPL-3"
16     SLOT="0"
17     IUSE=""
18 ago 1.3 KEYWORDS="amd64 ~x86 ~amd64-linux ~x86-linux"
19 jlec 1.1
20 jlec 1.4 RDEPEND="sys-libs/zlib"
21     DEPEND="${RDEPEND}"
22    
23 jlec 1.1 src_prepare() {
24     epatch \
25 jlec 1.2 "${FILESDIR}"/${P}-flags.patch \
26     "${FILESDIR}"/${P}-bfr-overfl.patch
27     sed \
28     -e '/ext_CFLAGS/s:-m64::g' \
29     -i configure* || die
30 jlec 1.1 eautoreconf
31     }
32    
33     src_install() {
34     default
35     insinto /usr/share/maq
36 jlec 1.2 doins "${WORKDIR}"/*.dat
37 jlec 1.1 doman maq.1
38     dodoc ${PN}.pdf
39     }

  ViewVC Help
Powered by ViewVC 1.1.20